Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
MSI1O43347 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 GPAA1P2-202ENST00000606848 1787 ntBASIC17.23■□□□□ 0.35
MSI1O43347 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 AL627223.1-201ENST00000416693 442 ntBASIC17.23■□□□□ 0.35
MSI1O43347 AC005237.2-201ENST00000434368 219 ntBASIC17.23■□□□□ 0.35
MSI1O43347 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 HLA-J-202ENST00000469281 1241 ntBASIC17.23■□□□□ 0.35
MSI1O43347 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.23■□□□□ 0.35
MSI1O43347 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
MSI1O43347 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.23■□□□□ 0.35
MSI1O43347 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MSI1O43347 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.23■□□□□ 0.35
MSI1O43347 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
MSI1O43347 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
MSI1O43347 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.22■□□□□ 0.35
MSI1O43347 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.22■□□□□ 0.35
MSI1O43347 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.22■□□□□ 0.35
MSI1O43347 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
MSI1O43347 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
MSI1O43347 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.22■□□□□ 0.35
MSI1O43347 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.22■□□□□ 0.35
MSI1O43347 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 METTL21AP1-201ENST00000438852 635 ntBASIC17.22■□□□□ 0.35
MSI1O43347 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.22■□□□□ 0.35
MSI1O43347 LINC01225-203ENST00000563550 1244 ntBASIC17.22■□□□□ 0.35
MSI1O43347 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MSI1O43347 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MSI1O43347 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MSI1O43347 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.22■□□□□ 0.35
MSI1O43347 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MSI1O43347 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 UXT-AS1-201ENST00000590504 1525 ntBASIC17.21■□□□□ 0.35
MSI1O43347 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.21■□□□□ 0.35
MSI1O43347 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MSI1O43347 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.21■□□□□ 0.35
MSI1O43347 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.21■□□□□ 0.35
MSI1O43347 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.21■□□□□ 0.35
MSI1O43347 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.21■□□□□ 0.35
MSI1O43347 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 FAM58DP-201ENST00000428076 619 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms