Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYRM1O43325 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.32□□□□□ -0.12
LYRM1O43325 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.32□□□□□ -0.12
LYRM1O43325 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LYRM1O43325 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LYRM1O43325 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.32□□□□□ -0.12
LYRM1O43325 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 AC026271.2-201ENST00000428091 497 ntBASIC14.32□□□□□ -0.12
LYRM1O43325 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.32□□□□□ -0.12
LYRM1O43325 CCR12P-201ENST00000446203 998 ntBASIC14.32□□□□□ -0.12
LYRM1O43325 UBE2SP1-201ENST00000450587 669 ntBASIC14.32□□□□□ -0.12
LYRM1O43325 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.32□□□□□ -0.12
LYRM1O43325 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.32□□□□□ -0.12
LYRM1O43325 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.32□□□□□ -0.12
LYRM1O43325 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 SBF1P1-201ENST00000444527 5631 ntBASIC14.32□□□□□ -0.12
LYRM1O43325 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.32□□□□□ -0.12
LYRM1O43325 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LYRM1O43325 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYRM1O43325 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LYRM1O43325 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYRM1O43325 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
LYRM1O43325 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.31□□□□□ -0.12
LYRM1O43325 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LYRM1O43325 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.31□□□□□ -0.12
LYRM1O43325 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.31□□□□□ -0.12
LYRM1O43325 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 IKBKGP1-201ENST00000612193 1073 ntBASIC14.31□□□□□ -0.12
LYRM1O43325 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LYRM1O43325 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LYRM1O43325 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms