Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 RNU1-129P-201ENST00000384064 167 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXN3O00409 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXN3O00409 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
FOXN3O00409 AC096734.2-201ENST00000562054 433 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 AC034105.1-201ENST00000563488 319 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 AC145285.3-201ENST00000564603 959 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 AL031432.2-201ENST00000566714 459 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 AL928711.1-201ENST00000570165 459 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 U1.21-201ENST00000580816 167 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXN3O00409 AC010507.1-201ENST00000633895 436 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXN3O00409 AL645728.2-201ENST00000641974 660 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
FOXN3O00409 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 AL596087.1-201ENST00000400979 1969 ntBASIC17.79■□□□□ 0.44
FOXN3O00409 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXN3O00409 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FOXN3O00409 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXN3O00409 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXN3O00409 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXN3O00409 AC104109.2-201ENST00000602919 1418 ntBASIC17.78■□□□□ 0.44
FOXN3O00409 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXN3O00409 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN3O00409 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXN3O00409 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN3O00409 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
FOXN3O00409 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 RPL13AP23-201ENST00000480739 586 ntBASIC17.77■□□□□ 0.44
FOXN3O00409 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXN3O00409 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXN3O00409 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN3O00409 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXN3O00409 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN3O00409 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXN3O00409 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 AC020765.3-201ENST00000613051 740 ntBASIC17.77■□□□□ 0.44
FOXN3O00409 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN3O00409 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN3O00409 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN3O00409 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN3O00409 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms