Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC020658.6-201ENST00000623564 1870 ntBASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC145098.2-201ENST00000623593 3026 ntBASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AL109659.2-201ENST00000606809 1674 ntBASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC090192.1-201ENST00000517740 490 ntBASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC060766.5-201ENST00000590539 871 ntBASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC006557.6-201ENST00000623071 864 ntBASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AC133041.1-202ENST00000642053 222 ntBASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.53□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BOLA2-SMG1P6H3BVE0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC098934.4-201ENST00000564127 592 ntBASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms