Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 AC005915.1-201ENST00000624912 2018 ntBASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 TOP3BP1-201ENST00000420768 1380 ntBASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 HCG4-201ENST00000418983 998 ntBASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 AC093520.2-201ENST00000561830 333 ntBASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 AL009183.1-201ENST00000603760 355 ntBASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA3F8WFD2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 IGHV3-62-201ENST00000520057 340 ntBASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 KRT8P49-201ENST00000604166 1432 ntBASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 AKAP8P1-201ENST00000434743 1349 ntBASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA3F8WFD2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms