Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC091804.1-201ENST00000486888 567 ntBASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.02■□□□□ 0.63
TMEM88BA6NKF7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM88BA6NKF7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM88BA6NKF7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AC134312.5-201ENST00000568031 1313 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AL671710.1-201ENST00000610245 2349 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AC007969.1-201ENST00000433675 447 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 HIST3H2BA-201ENST00000436555 524 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AL591846.1-201ENST00000451736 433 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 FAM86LP-201ENST00000478302 853 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AC020914.3-201ENST00000594712 304 ntBASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88BA6NKF7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 AC134915.1-201ENST00000426461 574 ntBASIC19■□□□□ 0.63
TMEM88BA6NKF7 AC012441.1-201ENST00000446669 685 ntBASIC19■□□□□ 0.63
TMEM88BA6NKF7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19■□□□□ 0.63
TMEM88BA6NKF7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88BA6NKF7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 AC106760.1-201ENST00000508690 800 ntBASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 AC124283.3-201ENST00000570869 594 ntBASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 AL049840.4-201ENST00000602422 811 ntBASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms