Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 BNIP3P29-201ENST00000598302 571 ntBASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 AC011447.5-201ENST00000616168 564 ntBASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PLEKHD1A6NEE1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 AL031731.1-201ENST00000642131 2094 ntBASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 AC104596.2-201ENST00000512793 793 ntBASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 AP002490.2-201ENST00000524791 560 ntBASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 AL645728.1-201ENST00000366221 2101 ntBASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC25.22■■□□□ 1.63
PLEKHD1A6NEE1 AC067852.2-201ENST00000590513 2313 ntBASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 AC245100.3-201ENST00000441281 285 ntBASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 USP32P1-208ENST00000506594 1164 ntBASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PLEKHD1A6NEE1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.2■■□□□ 1.63
PLEKHD1A6NEE1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PLEKHD1A6NEE1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC25.2■■□□□ 1.63
PLEKHD1A6NEE1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.63
PLEKHD1A6NEE1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC25.2■■□□□ 1.63
PLEKHD1A6NEE1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PLEKHD1A6NEE1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PLEKHD1A6NEE1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 AC020763.4-201ENST00000623414 4170 ntBASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms