Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 AC096734.2-201ENST00000562054 433 ntBASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC162PA2VCL2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
CCDC162PA2VCL2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 RHOQP3-201ENST00000437982 621 ntBASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC162PA2VCL2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 CROCCP1-201ENST00000426910 5675 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AC007967.2-201ENST00000432613 625 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 KRT18P2-201ENST00000447938 1258 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AL031432.2-201ENST00000566714 459 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AL928711.1-201ENST00000570165 459 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 BX640515.1-201ENST00000617215 977 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 AL645728.2-201ENST00000641974 660 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms