Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TUBB8P12-201ENST00000308911 1335 ntBASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TUBB7P-202ENST00000428444 1305 ntBASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TUBB8P7-204ENST00000567960 1332 ntBASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC211486.1-202ENST00000416371 468 ntBASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC004967.1-201ENST00000453589 447 ntBASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC211476.1-201ENST00000503899 468 ntBASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC026691.1-201ENST00000602502 2017 ntBASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MCCD1P2-201ENST00000423228 335 ntBASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC092183.1-201ENST00000469884 875 ntBASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC005829.1-201ENST00000570002 483 ntBASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.4□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BCAR1-209ENST00000546196 1340 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms