Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 MIR3652-201ENST00000579335 131 ntBASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC008667.4-201ENST00000607370 168 ntBASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC005622.1-201ENST00000636801 1703 ntBASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC013268.4-201ENST00000637413 2228 ntBASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC008677.1-201ENST00000519230 1561 ntBASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AF238378.1-201ENST00000526806 358 ntBASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-3A0A0A0MS03 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 SAPCD2P3-201ENST00000455031 850 ntBASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.52■□□□□ 0.08
TRBV5-3A0A0A0MS03 IGHV3-65-201ENST00000523210 341 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms