Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 CDC14C-201ENST00000428251 1719 ntBASIC15.79■□□□□ 0.12
AP4S1Q9Y587 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 MIR600HG-201ENST00000449175 5984 ntBASIC15.79■□□□□ 0.12
AP4S1Q9Y587 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 LINC02447-202ENST00000501888 2146 ntBASIC15.79■□□□□ 0.12
AP4S1Q9Y587 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 KRT8P49-201ENST00000604166 1432 ntBASIC15.78■□□□□ 0.12
AP4S1Q9Y587 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 AC005332.3-201ENST00000589904 676 ntBASIC15.78■□□□□ 0.12
AP4S1Q9Y587 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 AC023157.3-201ENST00000619086 2088 ntBASIC15.78■□□□□ 0.12
AP4S1Q9Y587 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4S1Q9Y587 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 AC140113.3-201ENST00000605663 199 ntBASIC15.77■□□□□ 0.12
AP4S1Q9Y587 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 AL023973.1-201ENST00000624619 620 ntBASIC15.77■□□□□ 0.12
AP4S1Q9Y587 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4S1Q9Y587 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 AC132938.5-201ENST00000624980 1813 ntBASIC15.77■□□□□ 0.11
AP4S1Q9Y587 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
AP4S1Q9Y587 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms