Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC010327.4-202ENST00000591484 748 ntBASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 UPF3AP3-201ENST00000420996 769 ntBASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 AC092865.5-201ENST00000545435 363 ntBASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 AKAP8P1-201ENST00000434743 1349 ntBASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA4Q9UN74 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ELL2P1-201ENST00000413990 1906 ntBASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 TFAMP1-201ENST00000412727 736 ntBASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 YBX1P5-201ENST00000509441 847 ntBASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 MIR3687-2-201ENST00000577708 61 ntBASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 MIR3687-1-201ENST00000614492 61 ntBASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHA4Q9UN74 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 POU5F1P6-201ENST00000466990 990 ntBASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 FAM86C2P-203ENST00000528684 1004 ntBASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 AL135744.1-201ENST00000565098 629 ntBASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms