Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC3Q9UN70 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGC3Q9UN70 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGC3Q9UN70 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC3Q9UN70 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 WASH6P-202ENST00000359512 1437 ntBASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 MIR940-201ENST00000401276 94 ntBASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 MCCD1P2-201ENST00000423228 335 ntBASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 AP000347.1-202ENST00000435868 847 ntBASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 AC002347.1-201ENST00000569543 541 ntBASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC3Q9UN70 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 AC004832.2-201ENST00000426397 482 ntBASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC3Q9UN70 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 AC005622.1-201ENST00000636801 1703 ntBASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms