Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AC099398.1-201ENST00000567919 2776 ntBASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AL512652.2-201ENST00000625156 1716 ntBASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 SLC25A39P2-201ENST00000537614 270 ntBASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 AL139011.1-202ENST00000642063 584 ntBASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.19■□□□□ 0.82
HMG20BQ9P0W2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 RBPMS2P1-201ENST00000437762 623 ntBASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms