Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 KRT223P-202ENST00000449164 1292 ntBASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 SERBP1P3-201ENST00000459980 809 ntBASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC092337.1-201ENST00000568699 1129 ntBASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC093726.1-201ENST00000608064 963 ntBASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC093525.8-201ENST00000624099 1342 ntBASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
KRTAP4-1Q9BYQ7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC060834.1-201ENST00000443027 2032 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 GPAA1P2-202ENST00000606848 1787 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 MIR4525-201ENST00000580000 75 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 LINC01115-203ENST00000606068 577 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AL391069.4-201ENST00000609583 481 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 AL033527.5-201ENST00000641382 801 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 CLK3P2-201ENST00000427566 1453 ntBASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
KRTAP4-1Q9BYQ7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms