Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.78□□□□□ -0.04
VRK1Q99986 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.78□□□□□ -0.04
VRK1Q99986 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.78□□□□□ -0.04
VRK1Q99986 CRYGEP-201ENST00000412192 528 ntBASIC14.78□□□□□ -0.04
VRK1Q99986 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.78□□□□□ -0.04
VRK1Q99986 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.78□□□□□ -0.04
VRK1Q99986 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.78□□□□□ -0.04
VRK1Q99986 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.78□□□□□ -0.04
VRK1Q99986 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.78□□□□□ -0.04
VRK1Q99986 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.78□□□□□ -0.04
VRK1Q99986 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.78□□□□□ -0.04
VRK1Q99986 AL139424.1-201ENST00000607572 797 ntBASIC14.78□□□□□ -0.04
VRK1Q99986 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.78□□□□□ -0.04
VRK1Q99986 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
VRK1Q99986 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 AC092850.2-201ENST00000623821 2697 ntBASIC14.78□□□□□ -0.04
VRK1Q99986 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
VRK1Q99986 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.77□□□□□ -0.04
VRK1Q99986 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.77□□□□□ -0.04
VRK1Q99986 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
VRK1Q99986 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.04
VRK1Q99986 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.77□□□□□ -0.04
VRK1Q99986 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.77□□□□□ -0.04
VRK1Q99986 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VRK1Q99986 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.77□□□□□ -0.04
VRK1Q99986 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.77□□□□□ -0.04
VRK1Q99986 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.77□□□□□ -0.05
VRK1Q99986 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VRK1Q99986 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.77□□□□□ -0.05
VRK1Q99986 RPS15P9-201ENST00000494093 319 ntBASIC14.77□□□□□ -0.05
VRK1Q99986 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.77□□□□□ -0.05
VRK1Q99986 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.77□□□□□ -0.05
VRK1Q99986 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
VRK1Q99986 AC139530.3-201ENST00000620344 690 ntBASIC14.77□□□□□ -0.05
VRK1Q99986 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
VRK1Q99986 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
VRK1Q99986 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
VRK1Q99986 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.77□□□□□ -0.05
VRK1Q99986 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VRK1Q99986 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VRK1Q99986 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VRK1Q99986 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VRK1Q99986 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VRK1Q99986 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VRK1Q99986 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms