Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL139010.1-201ENST00000454878 894 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN18Q99952 AC104596.2-201ENST00000512793 793 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN18Q99952 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN18Q99952 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.8■□□□□ 0.6
PTPN18Q99952 AC244093.1-201ENST00000610837 814 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN18Q99952 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN18Q99952 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN18Q99952 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN18Q99952 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN18Q99952 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 AL355994.2-201ENST00000447882 704 ntBASIC18.79■□□□□ 0.6
PTPN18Q99952 CSF2RBP1-201ENST00000447905 391 ntBASIC18.79■□□□□ 0.6
PTPN18Q99952 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN18Q99952 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN18Q99952 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN18Q99952 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN18Q99952 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.79■□□□□ 0.6
PTPN18Q99952 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN18Q99952 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN18Q99952 AL512652.2-201ENST00000625156 1716 ntBASIC18.79■□□□□ 0.6
PTPN18Q99952 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN18Q99952 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN18Q99952 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN18Q99952 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN18Q99952 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN18Q99952 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN18Q99952 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPN18Q99952 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN18Q99952 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN18Q99952 RN7SL399P-201ENST00000471648 279 ntBASIC18.78■□□□□ 0.6
PTPN18Q99952 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN18Q99952 AC108725.1-201ENST00000495472 409 ntBASIC18.78■□□□□ 0.6
PTPN18Q99952 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPN18Q99952 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN18Q99952 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN18Q99952 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN18Q99952 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN18Q99952 AL391069.4-201ENST00000609583 481 ntBASIC18.78■□□□□ 0.6
PTPN18Q99952 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTPN18Q99952 PCDHB17P-201ENST00000539533 2393 ntBASIC18.78■□□□□ 0.6
PTPN18Q99952 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN18Q99952 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN18Q99952 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN18Q99952 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
PTPN18Q99952 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN18Q99952 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 AC135050.7-201ENST00000624508 2218 ntBASIC18.77■□□□□ 0.6
PTPN18Q99952 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN18Q99952 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPN18Q99952 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.77■□□□□ 0.6
PTPN18Q99952 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN18Q99952 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN18Q99952 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms