Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.1■□□□□ 0.17
SLC38A3Q99624 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 AP002490.2-201ENST00000524791 560 ntBASIC16.1■□□□□ 0.17
SLC38A3Q99624 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 AC092364.2-202ENST00000597012 1073 ntBASIC16.1■□□□□ 0.17
SLC38A3Q99624 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 PCDHB17P-201ENST00000539533 2393 ntBASIC16.1■□□□□ 0.17
SLC38A3Q99624 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC38A3Q99624 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC38A3Q99624 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 MIR346-201ENST00000362234 95 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 SPDYE14P-201ENST00000442619 822 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 KLF2P3-201ENST00000451977 1087 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 AC125807.1-201ENST00000483097 614 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 AC105233.2-201ENST00000523697 349 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 AF228730.5-201ENST00000530288 346 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 ALG1L8P-201ENST00000533887 760 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 DUX4L27-201ENST00000554796 1261 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 AL138918.1-201ENST00000568306 659 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 MIR6080-201ENST00000617359 66 ntBASIC16.09■□□□□ 0.17
SLC38A3Q99624 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC38A3Q99624 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC38A3Q99624 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.17
SLC38A3Q99624 AL671710.1-201ENST00000610245 2349 ntBASIC16.08■□□□□ 0.17
SLC38A3Q99624 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC38A3Q99624 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms