Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 CYP2T1P-202ENST00000641596 2535 ntBASIC14.1□□□□□ -0.15
CLCC1Q96S66 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 AC005104.2-201ENST00000427818 678 ntBASIC14.1□□□□□ -0.15
CLCC1Q96S66 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 LINC00265-3P-201ENST00000447588 903 ntBASIC14.1□□□□□ -0.15
CLCC1Q96S66 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 AP002414.4-201ENST00000589764 1148 ntBASIC14.1□□□□□ -0.15
CLCC1Q96S66 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 AL139327.4-201ENST00000612362 153 ntBASIC14.1□□□□□ -0.15
CLCC1Q96S66 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.1□□□□□ -0.15
CLCC1Q96S66 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCC1Q96S66 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLCC1Q96S66 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 OR2I1P-210ENST00000642037 4691 ntBASIC14.09□□□□□ -0.15
CLCC1Q96S66 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 AC092068.3-201ENST00000587894 2016 ntBASIC14.09□□□□□ -0.15
CLCC1Q96S66 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 AL845331.1-201ENST00000424978 1190 ntBASIC14.09□□□□□ -0.15
CLCC1Q96S66 AC007967.3-201ENST00000434308 558 ntBASIC14.09□□□□□ -0.15
CLCC1Q96S66 AC091607.1-201ENST00000490318 1060 ntBASIC14.09□□□□□ -0.15
CLCC1Q96S66 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.09□□□□□ -0.15
CLCC1Q96S66 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCC1Q96S66 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLCC1Q96S66 AC092384.3-202ENST00000564646 2873 ntBASIC14.08□□□□□ -0.15
CLCC1Q96S66 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLCC1Q96S66 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.08□□□□□ -0.15
CLCC1Q96S66 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.08□□□□□ -0.15
CLCC1Q96S66 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLCC1Q96S66 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CLCC1Q96S66 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CLCC1Q96S66 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.08□□□□□ -0.15
CLCC1Q96S66 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLCC1Q96S66 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms