Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 AZGP1P1-201ENST00000411909 902 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 AC091804.1-201ENST00000486888 567 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 AP001889.1-201ENST00000525414 633 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 MIR4706-201ENST00000582134 82 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 U62317.3-201ENST00000608319 855 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 AL008638.5-201ENST00000623814 1298 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 AC133963.1-201ENST00000504166 1679 ntBASIC17.79■□□□□ 0.44
ALPK3Q96L96 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.79■□□□□ 0.44
ALPK3Q96L96 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALPK3Q96L96 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 KRT8P37-201ENST00000451609 1420 ntBASIC17.78■□□□□ 0.44
ALPK3Q96L96 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 AC104581.1-202ENST00000635932 2618 ntBASIC17.78■□□□□ 0.44
ALPK3Q96L96 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 KRT8P19-201ENST00000551916 1455 ntBASIC17.78■□□□□ 0.44
ALPK3Q96L96 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALPK3Q96L96 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.78■□□□□ 0.44
ALPK3Q96L96 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 AL136982.4-201ENST00000437689 1740 ntBASIC17.77■□□□□ 0.44
ALPK3Q96L96 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 AC253536.4-201ENST00000440539 267 ntBASIC17.77■□□□□ 0.44
ALPK3Q96L96 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 AL359711.2-201ENST00000563105 872 ntBASIC17.77■□□□□ 0.44
ALPK3Q96L96 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 MIR4722-201ENST00000578292 60 ntBASIC17.77■□□□□ 0.44
ALPK3Q96L96 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALPK3Q96L96 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.77■□□□□ 0.44
ALPK3Q96L96 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms