Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 KRT8P39-201ENST00000396270 1433 ntBASIC16.65■□□□□ 0.26
SHDQ96IW2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.65■□□□□ 0.26
SHDQ96IW2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.65■□□□□ 0.26
SHDQ96IW2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.65■□□□□ 0.26
SHDQ96IW2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.65■□□□□ 0.26
SHDQ96IW2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.65■□□□□ 0.26
SHDQ96IW2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.65■□□□□ 0.26
SHDQ96IW2 TIMM17BP1-201ENST00000545713 516 ntBASIC16.65■□□□□ 0.26
SHDQ96IW2 AC092552.1-201ENST00000547243 906 ntBASIC16.65■□□□□ 0.26
SHDQ96IW2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.65■□□□□ 0.26
SHDQ96IW2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 MIR4259-201ENST00000584466 101 ntBASIC16.65■□□□□ 0.26
SHDQ96IW2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHDQ96IW2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.65■□□□□ 0.26
SHDQ96IW2 AL033527.5-201ENST00000641382 801 ntBASIC16.65■□□□□ 0.26
SHDQ96IW2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SHDQ96IW2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.65■□□□□ 0.26
SHDQ96IW2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SHDQ96IW2 AL133338.1-201ENST00000565695 1517 ntBASIC16.65■□□□□ 0.26
SHDQ96IW2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
SHDQ96IW2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHDQ96IW2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
SHDQ96IW2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHDQ96IW2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 FAM86MP-201ENST00000340703 885 ntBASIC16.64■□□□□ 0.25
SHDQ96IW2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.64■□□□□ 0.25
SHDQ96IW2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.64■□□□□ 0.25
SHDQ96IW2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.64■□□□□ 0.25
SHDQ96IW2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 MIR6775-201ENST00000617557 69 ntBASIC16.64■□□□□ 0.25
SHDQ96IW2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 AL109936.8-201ENST00000641772 604 ntBASIC16.64■□□□□ 0.25
SHDQ96IW2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.64■□□□□ 0.25
SHDQ96IW2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SHDQ96IW2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 REXO1L6P-201ENST00000603433 1515 ntBASIC16.64■□□□□ 0.25
SHDQ96IW2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHDQ96IW2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.64■□□□□ 0.25
SHDQ96IW2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SHDQ96IW2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.63■□□□□ 0.25
SHDQ96IW2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.63■□□□□ 0.25
SHDQ96IW2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SHDQ96IW2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.63■□□□□ 0.25
SHDQ96IW2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SHDQ96IW2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SHDQ96IW2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.63■□□□□ 0.25
SHDQ96IW2 AC124947.2-201ENST00000547118 1133 ntBASIC16.63■□□□□ 0.25
SHDQ96IW2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.63■□□□□ 0.25
SHDQ96IW2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.63■□□□□ 0.25
SHDQ96IW2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.63■□□□□ 0.25
SHDQ96IW2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SHDQ96IW2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.63■□□□□ 0.25
SHDQ96IW2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms