Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
IFT43Q96FT9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 AC008741.2-201ENST00000612792 3115 ntBASIC17.2■□□□□ 0.34
IFT43Q96FT9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 AC007967.2-201ENST00000432613 625 ntBASIC17.2■□□□□ 0.34
IFT43Q96FT9 PRSS29P-201ENST00000440800 595 ntBASIC17.2■□□□□ 0.34
IFT43Q96FT9 PAWRP1-201ENST00000451083 565 ntBASIC17.2■□□□□ 0.34
IFT43Q96FT9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 AC008667.4-201ENST00000607370 168 ntBASIC17.2■□□□□ 0.34
IFT43Q96FT9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 AC079781.4-201ENST00000641908 219 ntBASIC17.2■□□□□ 0.34
IFT43Q96FT9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFT43Q96FT9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
IFT43Q96FT9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 IGHV3-65-201ENST00000523210 341 ntBASIC17.19■□□□□ 0.34
IFT43Q96FT9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 AL691403.2-201ENST00000618460 490 ntBASIC17.19■□□□□ 0.34
IFT43Q96FT9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.19■□□□□ 0.34
IFT43Q96FT9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.19■□□□□ 0.34
IFT43Q96FT9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFT43Q96FT9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms