Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GRAMD1AQ96CP6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 AC096633.1-201ENST00000422446 749 ntBASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 MTDHP4-201ENST00000600287 670 ntBASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 PAUPAR-201ENST00000630360 2965 ntBASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRAMD1AQ96CP6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 TSPY26P-202ENST00000565928 3884 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AC092364.2-201ENST00000596710 2692 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 RPSAP43-201ENST00000402237 625 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AC004832.2-201ENST00000426397 482 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AP002490.2-201ENST00000524791 560 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 NKAPP1-205ENST00000585790 367 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 HLA-A-202ENST00000376806 1854 ntBASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRAMD1AQ96CP6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRAMD1AQ96CP6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRAMD1AQ96CP6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRAMD1AQ96CP6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
GRAMD1AQ96CP6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRAMD1AQ96CP6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms