Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VPS33AQ96AX1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 AC079776.2-201ENST00000641154 1609 ntBASIC16.05■□□□□ 0.16
VPS33AQ96AX1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 ABCD1P5-201ENST00000445663 754 ntBASIC16.05■□□□□ 0.16
VPS33AQ96AX1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 KRT18P21-201ENST00000515767 1272 ntBASIC16.05■□□□□ 0.16
VPS33AQ96AX1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 AL139011.1-202ENST00000642063 584 ntBASIC16.05■□□□□ 0.16
VPS33AQ96AX1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 GGT3P-204ENST00000453783 1664 ntBASIC16.05■□□□□ 0.16
VPS33AQ96AX1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS33AQ96AX1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 AC010491.1-201ENST00000563101 2797 ntBASIC16.04■□□□□ 0.16
VPS33AQ96AX1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS33AQ96AX1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 SNX33P1-201ENST00000592116 1762 ntBASIC16.03■□□□□ 0.16
VPS33AQ96AX1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS33AQ96AX1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms