Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF34Q969K3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF34Q969K3 AL671710.1-201ENST00000610245 2349 ntBASIC17.42■□□□□ 0.38
RNF34Q969K3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF34Q969K3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF34Q969K3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF34Q969K3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
RNF34Q969K3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RNF34Q969K3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RNF34Q969K3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
RNF34Q969K3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 DNAJB3-201ENST00000446806 729 ntBASIC17.41■□□□□ 0.38
RNF34Q969K3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF34Q969K3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF34Q969K3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF34Q969K3 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF34Q969K3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF34Q969K3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF34Q969K3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF34Q969K3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RNF34Q969K3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF34Q969K3 AC078925.2-201ENST00000624013 1973 ntBASIC17.4■□□□□ 0.38
RNF34Q969K3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF34Q969K3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 AC092919.2-201ENST00000623631 1645 ntBASIC17.4■□□□□ 0.38
RNF34Q969K3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF34Q969K3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF34Q969K3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 YBX2P1-201ENST00000394192 760 ntBASIC17.4■□□□□ 0.38
RNF34Q969K3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF34Q969K3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RNF34Q969K3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF34Q969K3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF34Q969K3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.4■□□□□ 0.38
RNF34Q969K3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF34Q969K3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF34Q969K3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.39■□□□□ 0.38
RNF34Q969K3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.39■□□□□ 0.38
RNF34Q969K3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF34Q969K3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF34Q969K3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF34Q969K3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.38
RNF34Q969K3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RNF34Q969K3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF34Q969K3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
RNF34Q969K3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms