Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 RASA4DP-201ENST00000460726 1199 ntBASIC15.27■□□□□ 0.04
SGCDQ92629 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
SGCDQ92629 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.27■□□□□ 0.04
SGCDQ92629 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SGCDQ92629 AC012306.2-201ENST00000609350 630 ntBASIC15.27■□□□□ 0.04
SGCDQ92629 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
SGCDQ92629 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.27■□□□□ 0.04
SGCDQ92629 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SGCDQ92629 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
SGCDQ92629 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.27■□□□□ 0.03
SGCDQ92629 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 AL671710.1-201ENST00000610245 2349 ntBASIC15.27■□□□□ 0.03
SGCDQ92629 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.27■□□□□ 0.03
SGCDQ92629 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.27■□□□□ 0.03
SGCDQ92629 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGCDQ92629 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SGCDQ92629 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 CDC14C-201ENST00000428251 1719 ntBASIC15.26■□□□□ 0.03
SGCDQ92629 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
SGCDQ92629 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 HLA-F-220ENST00000434407 884 ntBASIC15.26■□□□□ 0.03
SGCDQ92629 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.26■□□□□ 0.03
SGCDQ92629 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 AC005363.2-201ENST00000618631 242 ntBASIC15.26■□□□□ 0.03
SGCDQ92629 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 LINC02447-202ENST00000501888 2146 ntBASIC15.26■□□□□ 0.03
SGCDQ92629 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 CICP24-201ENST00000605464 2705 ntBASIC15.26■□□□□ 0.03
SGCDQ92629 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 AC106881.1-201ENST00000605849 3329 ntBASIC15.26■□□□□ 0.03
SGCDQ92629 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.26■□□□□ 0.03
SGCDQ92629 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SGCDQ92629 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.26■□□□□ 0.03
SGCDQ92629 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGCDQ92629 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGCDQ92629 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SGCDQ92629 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.25■□□□□ 0.03
SGCDQ92629 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.25■□□□□ 0.03
SGCDQ92629 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SGCDQ92629 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.25■□□□□ 0.03
SGCDQ92629 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms