Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 FAM220CP-201ENST00000395253 831 ntBASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC103564.2-201ENST00000432853 1299 ntBASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC092384.3-202ENST00000564646 2873 ntBASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 RBM17P3-201ENST00000417687 1192 ntBASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AC122714.2-201ENST00000502787 707 ntBASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AP002469.2-201ENST00000531724 424 ntBASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AL662844.1-201ENST00000546340 181 ntBASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AC064862.7-201ENST00000604520 867 ntBASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 AL135999.2-201ENST00000622438 1686 ntBASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40AQ8WXH6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms