Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 AC027307.3-201ENST00000594262 1100 ntBASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 AL589739.1-201ENST00000607720 493 ntBASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC25.36■■□□□ 1.65
CCNB3Q8WWL7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 AC004840.1-201ENST00000636359 365 ntBASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNB3Q8WWL7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNB3Q8WWL7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 GK-202ENST00000378941 458 ntTSL 3 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 AGGF1P2-201ENST00000426656 2106 ntBASIC25.33■■□□□ 1.65
CCNB3Q8WWL7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms