Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 PCDHB17P-201ENST00000539533 2393 ntBASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SNHG9-202ENST00000564014 471 ntBASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 AC099522.2-201ENST00000607001 744 ntBASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FNDC9Q8TBE3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 AC092183.1-201ENST00000469884 875 ntBASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 MIR4492-201ENST00000581627 80 ntBASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 AL009183.1-201ENST00000603760 355 ntBASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
FNDC9Q8TBE3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms