Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 AC079781.3-201ENST00000449110 356 ntBASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 AL121912.1-201ENST00000603683 238 ntBASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 AL022326.1-202ENST00000641533 845 ntBASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP61Q8NHU2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 MTDHP4-201ENST00000600287 670 ntBASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 AC064862.7-201ENST00000604520 867 ntBASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 AC073592.4-201ENST00000623827 446 ntBASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP61Q8NHU2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 AL662844.4-201ENST00000606367 2838 ntBASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 PAUPAR-201ENST00000630360 2965 ntBASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 AC092171.3-201ENST00000610122 2651 ntBASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 TPM4P1-201ENST00000436100 807 ntBASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 FAM197Y8-203ENST00000450145 560 ntBASIC16.93■□□□□ 0.3
CFAP61Q8NHU2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms