Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.73■■□□□ 1.07
COL22A1Q8NFW1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.73■■□□□ 1.07
COL22A1Q8NFW1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.73■■□□□ 1.07
COL22A1Q8NFW1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL22A1Q8NFW1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL22A1Q8NFW1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL22A1Q8NFW1 LINC02012-201ENST00000608206 1725 ntBASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 AC104306.2-201ENST00000451877 341 ntBASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL22A1Q8NFW1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 HINT2P1-201ENST00000419438 481 ntBASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 AC134915.1-201ENST00000426461 574 ntBASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 AL022328.3-201ENST00000607943 679 ntBASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL22A1Q8NFW1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COL22A1Q8NFW1 KRT8P19-201ENST00000551916 1455 ntBASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 CHMP4BP1-201ENST00000556017 588 ntBASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL22A1Q8NFW1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 TOMM22P5-201ENST00000416399 439 ntBASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AP001258.2-201ENST00000529891 490 ntBASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 BICD1-207ENST00000551848 1962 ntBASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AC138028.6-201ENST00000616106 1482 ntBASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms