Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 TERF1P5-201ENST00000477545 1207 ntBASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 TERF1P2-201ENST00000583350 1212 ntBASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 AC011700.1-201ENST00000610409 2627 ntBASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SPTSSBQ8NFR3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 DGCR9-201ENST00000609630 2415 ntBASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms