Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AL391256.1-201ENST00000443260 1855 ntBASIC16.48■□□□□ 0.23
SNX31Q8N9S9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AC073648.2-201ENST00000510116 352 ntBASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX31Q8N9S9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 PTCHD3P3-201ENST00000403073 906 ntBASIC16.47■□□□□ 0.23
SNX31Q8N9S9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 ELK2BP-201ENST00000415014 1224 ntBASIC16.47■□□□□ 0.23
SNX31Q8N9S9 LAGE3P1-201ENST00000425356 484 ntBASIC16.47■□□□□ 0.23
SNX31Q8N9S9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 AC006557.2-201ENST00000592985 1240 ntBASIC16.47■□□□□ 0.23
SNX31Q8N9S9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX31Q8N9S9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 KRT8P49-201ENST00000604166 1432 ntBASIC16.46■□□□□ 0.23
SNX31Q8N9S9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.46■□□□□ 0.23
SNX31Q8N9S9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 PI4KAP1-204ENST00000612579 1703 ntBASIC16.46■□□□□ 0.23
SNX31Q8N9S9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX31Q8N9S9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms