Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.46□□□□□ -0.25
LINC00311Q8N616 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 AC002056.1-201ENST00000395613 760 ntBASIC13.46□□□□□ -0.25
LINC00311Q8N616 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00311Q8N616 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00311Q8N616 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00311Q8N616 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00311Q8N616 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00311Q8N616 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00311Q8N616 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.46□□□□□ -0.26
LINC00311Q8N616 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00311Q8N616 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00311Q8N616 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00311Q8N616 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms