Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 CETN4P-206ENST00000642099 2168 ntBASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPOQ8N3V7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPOQ8N3V7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 HTR7P1-202ENST00000624664 4411 ntBASIC16.83■□□□□ 0.29
SYNPOQ8N3V7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 AC098614.1-201ENST00000368528 745 ntBASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 SPTSSB-204ENST00000617024 1292 ntBASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPOQ8N3V7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 AP001094.4-201ENST00000579008 2176 ntBASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 BTBD7P1-201ENST00000447253 1453 ntBASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms