Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 UGT1A2P-201ENST00000454886 866 ntBASIC16.88■□□□□ 0.29
PGBD3Q8N328 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 AP000842.3-202ENST00000569238 1080 ntBASIC16.88■□□□□ 0.29
PGBD3Q8N328 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PGBD3Q8N328 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.88■□□□□ 0.29
PGBD3Q8N328 AC131009.4-201ENST00000624048 1740 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 MIR4453-201ENST00000584019 89 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 LINC02560-201ENST00000596379 459 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 AL158211.3-201ENST00000607385 239 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 AL035252.4-201ENST00000624174 288 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 AL021920.2-201ENST00000624828 1351 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
PGBD3Q8N328 AC093525.9-201ENST00000624961 1746 ntBASIC16.87■□□□□ 0.29
PGBD3Q8N328 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PGBD3Q8N328 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 AD000864.1-201ENST00000624076 2295 ntBASIC16.86■□□□□ 0.29
PGBD3Q8N328 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PGBD3Q8N328 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.86■□□□□ 0.29
PGBD3Q8N328 AC097493.3-201ENST00000509725 367 ntBASIC16.86■□□□□ 0.29
PGBD3Q8N328 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms