Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 RNU1-129P-201ENST00000384064 167 ntBASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 HCG4B-203ENST00000450128 991 ntBASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 AC096734.2-201ENST00000562054 433 ntBASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 U1.21-201ENST00000580816 167 ntBASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 Z83851.2-201ENST00000609564 659 ntBASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 AC007064.4-201ENST00000637740 555 ntBASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF440Q8IYI8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF440Q8IYI8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF440Q8IYI8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF440Q8IYI8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF440Q8IYI8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF440Q8IYI8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 HLA-A-201ENST00000376802 1334 ntBASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 HMGA1P7-201ENST00000406908 502 ntBASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AL031055.1-201ENST00000606362 631 ntBASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF440Q8IYI8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms