Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 BCRP2-202ENST00000447763 634 ntBASIC23.17■■□□□ 1.3
UBR1Q8IWV7 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 BCRP6-201ENST00000510112 632 ntBASIC23.17■■□□□ 1.3
UBR1Q8IWV7 BCRP7-201ENST00000511549 544 ntBASIC23.17■■□□□ 1.3
UBR1Q8IWV7 AP001889.1-201ENST00000525414 633 ntBASIC23.17■■□□□ 1.3
UBR1Q8IWV7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.17■■□□□ 1.3
UBR1Q8IWV7 AL355864.2-201ENST00000447420 863 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 FAM86HP-204ENST00000513466 959 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 RNA5SP423-201ENST00000517127 109 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 CROCCP2-202ENST00000412962 2773 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 SOCS2P1-201ENST00000417727 557 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 PFN1P12-201ENST00000455938 534 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 AL365330.1-201ENST00000607459 531 ntBASIC23.16■■□□□ 1.3
UBR1Q8IWV7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBR1Q8IWV7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 AC074338.1-201ENST00000416825 156 ntBASIC23.15■■□□□ 1.3
UBR1Q8IWV7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 RPL13AP20-201ENST00000459725 609 ntBASIC23.15■■□□□ 1.3
UBR1Q8IWV7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
UBR1Q8IWV7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 AC012441.1-201ENST00000446669 685 ntBASIC23.14■■□□□ 1.3
UBR1Q8IWV7 FAM86LP-201ENST00000478302 853 ntBASIC23.14■■□□□ 1.3
UBR1Q8IWV7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 RN7SL560P-201ENST00000577943 264 ntBASIC23.14■■□□□ 1.3
UBR1Q8IWV7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 MSTO2P-201ENST00000314835 1709 ntBASIC23.14■■□□□ 1.3
UBR1Q8IWV7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
UBR1Q8IWV7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.14■■□□□ 1.29
UBR1Q8IWV7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBR1Q8IWV7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
UBR1Q8IWV7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBR1Q8IWV7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBR1Q8IWV7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBR1Q8IWV7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms