Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM50Q86XT4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 AC073439.1-201ENST00000624121 1774 ntBASIC18.5■□□□□ 0.55
TRIM50Q86XT4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 RNA5SP421-201ENST00000516864 134 ntBASIC18.5■□□□□ 0.55
TRIM50Q86XT4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 AC012313.1-201ENST00000593393 3059 ntBASIC18.5■□□□□ 0.55
TRIM50Q86XT4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 AL391256.1-201ENST00000443260 1855 ntBASIC18.5■□□□□ 0.55
TRIM50Q86XT4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM50Q86XT4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 AC092580.3-201ENST00000430932 139 ntBASIC18.49■□□□□ 0.55
TRIM50Q86XT4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 AC069120.2-201ENST00000524091 540 ntBASIC18.49■□□□□ 0.55
TRIM50Q86XT4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM50Q86XT4 KRT8P39-201ENST00000396270 1433 ntBASIC18.49■□□□□ 0.55
TRIM50Q86XT4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 AC097493.3-201ENST00000509725 367 ntBASIC18.48■□□□□ 0.55
TRIM50Q86XT4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 AL158211.3-201ENST00000607385 239 ntBASIC18.48■□□□□ 0.55
TRIM50Q86XT4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM50Q86XT4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM50Q86XT4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms