Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 FAM220CP-201ENST00000395253 831 ntBASIC14.88□□□□□ -0.03
LRRC28Q86X40 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 AC007967.3-201ENST00000434308 558 ntBASIC14.88□□□□□ -0.03
LRRC28Q86X40 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 SAPCD2P3-201ENST00000455031 850 ntBASIC14.88□□□□□ -0.03
LRRC28Q86X40 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AL645728.1-201ENST00000366221 2101 ntBASIC14.87□□□□□ -0.03
LRRC28Q86X40 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AC026396.1-201ENST00000419388 421 ntBASIC14.87□□□□□ -0.03
LRRC28Q86X40 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRC28Q86X40 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRC28Q86X40 FRMD8P1-201ENST00000440433 1524 ntBASIC14.87□□□□□ -0.03
LRRC28Q86X40 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms