Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC141Q6ZP82 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 AC008735.3-201ENST00000596646 500 ntBASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CCDC141Q6ZP82 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 SNX29P1-201ENST00000548357 1007 ntBASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 RAB43P1-201ENST00000561790 589 ntBASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC141Q6ZP82 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 RPS2P32-201ENST00000439199 892 ntBASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 U82695.1-201ENST00000635752 1889 ntBASIC24.41■■□□□ 1.5
CCDC141Q6ZP82 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 MIR658-201ENST00000385210 100 ntBASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 AC022210.1-201ENST00000449856 793 ntBASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 AL158212.4-201ENST00000624062 1286 ntBASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 Z97205.2-201ENST00000564697 1639 ntBASIC24.4■■□□□ 1.5
CCDC141Q6ZP82 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 AC007389.4-201ENST00000454674 793 ntBASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 USP32P1-208ENST00000506594 1164 ntBASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 BANP-227ENST00000626016 2144 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC141Q6ZP82 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC141Q6ZP82 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms