Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 PGAM5P1-201ENST00000518923 814 ntBASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 AC011840.4-201ENST00000578471 627 ntBASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 AL049840.3-201ENST00000602669 611 ntBASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 AL136379.1-201ENST00000623471 2642 ntBASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCNI2Q6ZMN8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 AC027796.2-201ENST00000575326 344 ntBASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 AC008608.2-201ENST00000606089 416 ntBASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 MIR7706-201ENST00000613747 67 ntBASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCNI2Q6ZMN8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms