Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AC141586.5-201ENST00000624546 2050 ntBASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC62Q6P9F0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC62Q6P9F0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC62Q6P9F0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TSSK5P-201ENST00000423978 907 ntBASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 FAM207CP-201ENST00000443486 507 ntBASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC62Q6P9F0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 HLA-H-201ENST00000383620 1096 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 MRPS18AP1-201ENST00000414458 589 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 AC241585.1-201ENST00000433527 519 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 SPTSSB-204ENST00000617024 1292 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 AL590560.3-201ENST00000623350 461 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 AC073592.8-201ENST00000624126 511 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC62Q6P9F0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 AC012313.1-201ENST00000593393 3059 ntBASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 FAM220BP-201ENST00000377689 816 ntBASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 LINC02560-201ENST00000596379 459 ntBASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 AC003101.2-201ENST00000612557 442 ntBASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 AC008761.3-201ENST00000624803 892 ntBASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms