Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 MIR6775-201ENST00000617557 69 ntBASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 AC018665.1-201ENST00000622927 1362 ntBASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
CDC42BPAQ5VT25 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42BPAQ5VT25 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42BPAQ5VT25 FAM86MP-201ENST00000340703 885 ntBASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 MEP1AP4-201ENST00000423244 1087 ntBASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 AC006538.1-201ENST00000567905 1585 ntBASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 AC139713.2-201ENST00000641328 2723 ntBASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPAQ5VT25 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 NEU3-203ENST00000529024 581 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 BRI3BPP1-201ENST00000594224 787 ntBASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 CDC14C-201ENST00000428251 1719 ntBASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 U82695.1-201ENST00000635752 1889 ntBASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 GRN-214ENST00000589265 1632 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 BNIP3P42-201ENST00000454982 569 ntBASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 BNIP3P29-201ENST00000598302 571 ntBASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 AC011447.5-201ENST00000616168 564 ntBASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPAQ5VT25 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 AMT-232ENST00000636199 1546 ntTSL 5 BASIC24.68■■□□□ 1.54
CDC42BPAQ5VT25 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 AC092658.1-201ENST00000505836 891 ntBASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPAQ5VT25 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 AC124283.3-201ENST00000570869 594 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms