Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AL121912.1-201ENST00000603683 238 ntBASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AC068587.6-202ENST00000641839 5619 ntBASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AC005052.1-201ENST00000625181 2492 ntBASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 TPM4P1-201ENST00000436100 807 ntBASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.51□□□□□ -0.09
ATPAF1Q5TC12 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AL135999.2-201ENST00000622438 1686 ntBASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 ACTG1P4-201ENST00000425123 1122 ntBASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AC148477.5-201ENST00000625164 1645 ntBASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms