Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 TOP3BP1-201ENST00000420768 1380 ntBASIC14.22□□□□□ -0.13
LRRK2Q5S007 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 MAGEA5-201ENST00000446757 942 ntBASIC14.22□□□□□ -0.13
LRRK2Q5S007 AC020765.3-201ENST00000613051 740 ntBASIC14.22□□□□□ -0.13
LRRK2Q5S007 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.21□□□□□ -0.13
LRRK2Q5S007 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 HIST2H2BC-201ENST00000498492 580 ntBASIC14.21□□□□□ -0.13
LRRK2Q5S007 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 RHOXF1P1-202ENST00000635473 501 ntBASIC14.21□□□□□ -0.13
LRRK2Q5S007 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRK2Q5S007 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRK2Q5S007 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRRK2Q5S007 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRK2Q5S007 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRK2Q5S007 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 FRMD8P1-201ENST00000440433 1524 ntBASIC14.2□□□□□ -0.14
LRRK2Q5S007 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 FNTAP2-201ENST00000430308 634 ntBASIC14.2□□□□□ -0.14
LRRK2Q5S007 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRK2Q5S007 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRK2Q5S007 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms