Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SNX33P1-201ENST00000592116 1762 ntBASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 AC002310.6-201ENST00000624451 1377 ntBASIC16.13■□□□□ 0.17
ATP6AP1LQ52LC2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 AL365203.3-201ENST00000609742 2057 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 KRT8P39-201ENST00000396270 1433 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 AL512652.2-201ENST00000625156 1716 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 AC087163.2-201ENST00000457299 853 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 AF228730.7-201ENST00000641842 219 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 AL596087.1-201ENST00000400979 1969 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 AL031731.1-201ENST00000642131 2094 ntBASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATP6AP1LQ52LC2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6AP1LQ52LC2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms