Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 RPL37AP1-201ENST00000412502 279 ntBASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 AC105021.1-202ENST00000570572 669 ntBASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 RN7SL828P-201ENST00000607615 303 ntBASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 AC005052.1-201ENST00000625181 2492 ntBASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NBPF1Q3BBV0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 TSPY16P-201ENST00000449843 468 ntBASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
NBPF1Q3BBV0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 AC002472.2-201ENST00000442739 958 ntBASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF1Q3BBV0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 AC241585.1-201ENST00000433527 519 ntBASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 MAX-210ENST00000555419 765 ntTSL 5 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF1Q3BBV0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms