Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.7■□□□□ 0.1
PRTGQ2VWP7 AC073439.1-201ENST00000624121 1774 ntBASIC15.7■□□□□ 0.1
PRTGQ2VWP7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 UXT-AS1-201ENST00000590504 1525 ntBASIC15.69■□□□□ 0.1
PRTGQ2VWP7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AC142381.1-201ENST00000426099 345 ntBASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AGGF1P2-201ENST00000426656 2106 ntBASIC15.69■□□□□ 0.1
PRTGQ2VWP7 GPS2P2-201ENST00000430745 888 ntBASIC15.69■□□□□ 0.1
PRTGQ2VWP7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 SLC25A39P2-201ENST00000537614 270 ntBASIC15.69■□□□□ 0.1
PRTGQ2VWP7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRTGQ2VWP7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 AC020916.1-201ENST00000587762 1774 ntBASIC15.68■□□□□ 0.1
PRTGQ2VWP7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 METTL21AP1-201ENST00000438852 635 ntBASIC15.68■□□□□ 0.1
PRTGQ2VWP7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 FOXO1B-201ENST00000504678 1527 ntBASIC15.68■□□□□ 0.1
PRTGQ2VWP7 FLJ38576-201ENST00000623820 2459 ntBASIC15.68■□□□□ 0.1
PRTGQ2VWP7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.68■□□□□ 0.1
PRTGQ2VWP7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms