Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.95■■□□□ 1.1
COL16A1Q07092 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
COL16A1Q07092 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 AC018735.1-201ENST00000437208 1502 ntBASIC21.95■■□□□ 1.1
COL16A1Q07092 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL16A1Q07092 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC21.95■■□□□ 1.1
COL16A1Q07092 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.95■■□□□ 1.1
COL16A1Q07092 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.95■■□□□ 1.1
COL16A1Q07092 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.95■■□□□ 1.1
COL16A1Q07092 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC21.95■■□□□ 1.1
COL16A1Q07092 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.95■■□□□ 1.1
COL16A1Q07092 KRT8P39-201ENST00000396270 1433 ntBASIC21.95■■□□□ 1.1
COL16A1Q07092 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.94■■□□□ 1.1
COL16A1Q07092 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 AC093503.3-201ENST00000624917 2352 ntBASIC21.94■■□□□ 1.1
COL16A1Q07092 AC006277.1-201ENST00000624348 1610 ntBASIC21.94■■□□□ 1.1
COL16A1Q07092 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL16A1Q07092 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.94■■□□□ 1.1
COL16A1Q07092 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC21.94■■□□□ 1.1
COL16A1Q07092 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.94■■□□□ 1.1
COL16A1Q07092 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.94■■□□□ 1.1
COL16A1Q07092 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.94■■□□□ 1.1
COL16A1Q07092 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL16A1Q07092 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL16A1Q07092 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL16A1Q07092 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.93■■□□□ 1.1
COL16A1Q07092 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.93■■□□□ 1.1
COL16A1Q07092 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.93■■□□□ 1.1
COL16A1Q07092 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
COL16A1Q07092 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
COL16A1Q07092 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL16A1Q07092 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 DEF8-202ENST00000418391 852 ntTSL 2 BASIC21.93■■□□□ 1.1
COL16A1Q07092 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC21.93■■□□□ 1.1
COL16A1Q07092 AC009486.1-201ENST00000569860 813 ntBASIC21.93■■□□□ 1.1
COL16A1Q07092 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.93■■□□□ 1.1
COL16A1Q07092 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.93■■□□□ 1.1
COL16A1Q07092 AP003419.4-201ENST00000616071 517 ntBASIC21.93■■□□□ 1.1
COL16A1Q07092 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.93■■□□□ 1.1
COL16A1Q07092 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL16A1Q07092 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL16A1Q07092 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
COL16A1Q07092 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
COL16A1Q07092 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.92■■□□□ 1.1
COL16A1Q07092 FTLP10-202ENST00000505798 471 ntBASIC21.92■■□□□ 1.1
COL16A1Q07092 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.92■■□□□ 1.1
COL16A1Q07092 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC21.92■■□□□ 1.1
COL16A1Q07092 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.92■■□□□ 1.1
COL16A1Q07092 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
COL16A1Q07092 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL16A1Q07092 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 HNRNPA1P32-201ENST00000396326 963 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 C1QBPP1-201ENST00000400117 770 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 AC074338.1-201ENST00000416825 156 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms